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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807335.1_cds_XP_016494801.1_9181
CDS Infomation

[gene=LOC107813993] [db_xref=GeneID:107813993] [protein=lysine--tRNA ligase-like isoform X2] [protein_id=XP_016494801.1] [location=join(47866..47895,48020..48185,48261..48354,48566..48651,48857..48969,49065..49145,49317..49442,49535..49817,49904..50000,50100..50256,50405..50548,50852..50920,51269..51412,51532..51567)] [gbkey=CDS]
Sequence

ATGTCTGATAGTGATAGTTTGGATCCTACCCAATATCGGGCTAACAGGTTGAAGAGCCTT
GAATTGTTGAGAGAATCCGGAATAAATCCGTATTCAGAAGCACCTCGCAACATAATCTCT
ATCCGTCATTTTATCAGCAAGTATGCTTATTTAAGTGCTGGAGAGAAACTTGAGGCCATT
GAAGTCTCCTTAGCAGGGAGAGTAATTACCAAGCGAGCATCATCATCAAAGCTCTATTTC
TATGAACTGCTTGATGGCGGGGCGAGAGTACAAGTAATGGCGGATGCAAGGGATTCAGCT
ATGGATACTGTTGCATTTTCTACCTATCACTCTGGAGTGAAGCGAGGCGACATCATTGCT
ATCTGTGGATATCCTGGGAAGAGTAAGAGAGGAGAGCTAAGTATCTTTCCAAGATCTTTG
GAAGTGAAAGCCCTTTGCCTGCACATGCTACCAAGGCGTTTGGCTGTCGTAGATGGAACT
CGGACACAGAGTTCCCAAGGAACAACAACTAACGGTACTTGGACTCCAGGAGATGCAAGA
AATCCTGCCGCATATGTGTTAACTGACCAGGAAACTCGGTATCGTCAAAGGTACTTAGAC
CTCATGATAAATCCAGAAGTTCAAAATGTATTCAGGACTCGCACCAGAATCATTAAATAT
ATCAAGCGTTTCCTCGATGATCTTGAGTTTCTCGAGGTGGAGACTCCTAATATGAATTTG
ACTGCTGGAGGAGCTTCCGCGAGACCATTTACTACTTACTATAATGAGTTGGACACAAAC
GTACACATGCGTGTTTCCCCTGAGCTTTATCTTAAGATGTTGGTTGTTGGTGGATTTAAT
CGTGTTTATGAGATCGGGAAGGTATTCAGGAATGAGGGAATGGATCAAACTCATTGTCCT
GAATTCACAATGTGTGAATTTTATATGGCTTATGCTGATTACAATGATTTGATGGATTTG
ACAGAGCAACTATTATCAGGTATGGTGAAGGAACTAACCGGAAGCCATAAAATAAGGTAT
CATGCTAATGGCTCGGATAATGAACCAATAGAAATGGACTTCACTCCTCCATTCAGAAAA
ATGGATATTCTGTCAGAGTTGGAGAGAGTGGCTAACATCAATATACCTAGAGATCTTTCC
AGTGAAGCTGCTAATAAGTACTTGCTAGATGTATGTGAAAAGTTTGATGTCAAGTGTCCT
CCACCTCATACCACAGCGCGTTTGCTCGATAAGCTAGTTGGTCATTTTATTGAAGTAAGC
TGCATAAATCCCACTTTTATTATCAACCATCCTGAGATCATGAGTCCACTGGCAAAATCG
CACAGATCAGCGCCTGGTTTGACTGAGCGTTTCAACTTATTTGTAAACAAGATAGAGCTA
TGCGATGCCTATACTGAACTAAATGATCCTGTAGAACAGAGTCGACGTTTCACTGAGCAA
TTAAAGGATCGAACATCAGGAGACGACGAGGCAATGGTTTTGGATGAATCTTACATTACT
GCTTTAGAGTATGGATTACCTCCTACTGCTGGATTTGGTATGGGAATTGATAGACTTACA
ATGTTGCTAACAGATTCACAAAATGTCAAGGAAGCAATCCTCTTTCCACCCATGAGACCA
CAGTAA

Peptide Sequence

PEP ID

XP_016494801.1
PEP Infomation

PREDICTED: lysine--tRNA ligase-like isoform X2 [Nicotiana tabacum]
Sequence

MSDSDSLDPTQYRANRLKSLELLRESGINPYSEAPRNIISIRHFISKYAYLSAGEKLEAI
EVSLAGRVITKRASSSKLYFYELLDGGARVQVMADARDSAMDTVAFSTYHSGVKRGDIIA
ICGYPGKSKRGELSIFPRSLEVKALCLHMLPRRLAVVDGTRTQSSQGTTTNGTWTPGDAR
NPAAYVLTDQETRYRQRYLDLMINPEVQNVFRTRTRIIKYIKRFLDDLEFLEVETPNMNL
TAGGASARPFTTYYNELDTNVHMRVSPELYLKMLVVGGFNRVYEIGKVFRNEGMDQTHCP
EFTMCEFYMAYADYNDLMDLTEQLLSGMVKELTGSHKIRYHANGSDNEPIEMDFTPPFRK
MDILSELERVANINIPRDLSSEAANKYLLDVCEKFDVKCPPPHTTARLLDKLVGHFIEVS
CINPTFIINHPEIMSPLAKSHRSAPGLTERFNLFVNKIELCDAYTELNDPVEQSRRFTEQ
LKDRTSGDDEAMVLDESYITALEYGLPPTAGFGMGIDRLTMLLTDSQNVKEAILFPPMRP
Q

Transcript Sequence

Gene sequence data has not been registered.